Serveur d'exploration sur la COVID en France

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COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.

Identifieur interne : 001591 ( Main/Exploration ); précédent : 001590; suivant : 001592

COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.

Auteurs : Marek Ostaszewski [Luxembourg (pays)] ; Alexander Mazein [Luxembourg (pays), France] ; Marc E. Gillespie [Canada, États-Unis] ; Inna Kuperstein [France] ; Anna Niarakis [France] ; Henning Hermjakob [Royaume-Uni] ; Alexander R. Pico [États-Unis] ; Egon L. Willighagen [Pays-Bas] ; Chris T. Evelo [Pays-Bas] ; Jan Hasenauer [Allemagne] ; Falk Schreiber [Allemagne, Australie] ; Andreas Dr Ger [Allemagne] ; Emek Demir [États-Unis] ; Olaf Wolkenhauer [Allemagne, Afrique du Sud] ; Laura I. Furlong [Espagne] ; Emmanuel Barillot [France] ; Joaquin Dopazo [Espagne] ; Aurelio Orta-Resendiz [France] ; Francesco Messina [Italie] ; Alfonso Valencia [Espagne] ; Akira Funahashi [Japon] ; Hiroaki Kitano [Japon] ; Charles Auffray [France] ; Rudi Balling [Luxembourg (pays)] ; Reinhard Schneider [Luxembourg (pays)]

Source :

RBID : pubmed:32371892

Descripteurs français

English descriptors


DOI: 10.1038/s41597-020-0477-8
PubMed: 32371892
PubMed Central: PMC7200764


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

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<nlm:affiliation>Monash University, Faculty of Information Technology, Melbourne, Australia.</nlm:affiliation>
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<name sortKey="Demir, Emek" sort="Demir, Emek" uniqKey="Demir E" first="Emek" last="Demir">Emek Demir</name>
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<nlm:affiliation>Department of Systems Biology & Bioinformatics, University of Rostock, Rostock, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
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<nlm:affiliation>Stellenbosch Institute of Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, 7602, Stellenbosch, South Africa.</nlm:affiliation>
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<name sortKey="Furlong, Laura I" sort="Furlong, Laura I" uniqKey="Furlong L" first="Laura I" last="Furlong">Laura I. Furlong</name>
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<nlm:affiliation>Research Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Department of Experimental and Health Sciences, Pompeu Fabra University, Barcelona, Spain.</nlm:affiliation>
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<name sortKey="Dopazo, Joaquin" sort="Dopazo, Joaquin" uniqKey="Dopazo J" first="Joaquin" last="Dopazo">Joaquin Dopazo</name>
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<nlm:affiliation>Clinical Bioinformatics Area, Fundación Progreso y Salud. Hosp. Virgen del Rocío, Sevilla, Spain.</nlm:affiliation>
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<nlm:affiliation>INB-ELIXIR-es, FPS, Hospital Virgen del Rocío, Sevilla, 42013, Spain.</nlm:affiliation>
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<nlm:affiliation>Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Sevilla, Spain.</nlm:affiliation>
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<wicri:regionArea>Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Sevilla</wicri:regionArea>
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<author>
<name sortKey="Orta Resendiz, Aurelio" sort="Orta Resendiz, Aurelio" uniqKey="Orta Resendiz A" first="Aurelio" last="Orta-Resendiz">Aurelio Orta-Resendiz</name>
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<nlm:affiliation>HIV, Inflammation and Persistence Unit, Virology Department, Institut Pasteur, Paris, France.</nlm:affiliation>
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<nlm:affiliation>Bio Sorbonne Paris Cité, Université de Paris, Paris, France.</nlm:affiliation>
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<author>
<name sortKey="Messina, Francesco" sort="Messina, Francesco" uniqKey="Messina F" first="Francesco" last="Messina">Francesco Messina</name>
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<nlm:affiliation>Dipartimento di Epidemiologia Ricerca Pre-Clinica e Diagnostica Avanzata, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Dipartimento di Epidemiologia Ricerca Pre-Clinica e Diagnostica Avanzata, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome</wicri:regionArea>
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<settlement type="city">Rome</settlement>
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<nlm:affiliation>COVID 19 INMI Network Medicine for IDs Study Group, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>COVID 19 INMI Network Medicine for IDs Study Group, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome</wicri:regionArea>
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<name sortKey="Valencia, Alfonso" sort="Valencia, Alfonso" uniqKey="Valencia A" first="Alfonso" last="Valencia">Alfonso Valencia</name>
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<nlm:affiliation>Barcelona Supercomputing Center (BSC), Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
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<settlement type="city">Barcelone</settlement>
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<nlm:affiliation>Institucio Catalana de Recerca I Estudis Avançats (ICREA), Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
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<name sortKey="Funahashi, Akira" sort="Funahashi, Akira" uniqKey="Funahashi A" first="Akira" last="Funahashi">Akira Funahashi</name>
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<nlm:affiliation>Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa</wicri:regionArea>
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<name sortKey="Kitano, Hiroaki" sort="Kitano, Hiroaki" uniqKey="Kitano H" first="Hiroaki" last="Kitano">Hiroaki Kitano</name>
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<nlm:affiliation>The Systems Biology Institute, Shinagawa, Tokyo, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>The Systems Biology Institute, Shinagawa, Tokyo</wicri:regionArea>
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<nlm:affiliation>Okinawa Institute of Science and Technology Graduate University, Kunigami, Okinawa, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Okinawa Institute of Science and Technology Graduate University, Kunigami, Okinawa</wicri:regionArea>
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<nlm:affiliation>Sony Computer Science Laboratories, Inc., Tokyo, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
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<name sortKey="Auffray, Charles" sort="Auffray, Charles" uniqKey="Auffray C" first="Charles" last="Auffray">Charles Auffray</name>
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<title xml:lang="en">COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.</title>
<author>
<name sortKey="Ostaszewski, Marek" sort="Ostaszewski, Marek" uniqKey="Ostaszewski M" first="Marek" last="Ostaszewski">Marek Ostaszewski</name>
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<nlm:affiliation>Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.</nlm:affiliation>
<country xml:lang="fr">Luxembourg (pays)</country>
<wicri:regionArea>Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux</wicri:regionArea>
<orgName type="university">Université du Luxembourg</orgName>
<placeName>
<settlement type="city">Luxembourg</settlement>
</placeName>
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</author>
<author>
<name sortKey="Mazein, Alexander" sort="Mazein, Alexander" uniqKey="Mazein A" first="Alexander" last="Mazein">Alexander Mazein</name>
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<wicri:regionArea>Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux</wicri:regionArea>
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<settlement type="city">Luxembourg</settlement>
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<country xml:lang="fr">France</country>
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</affiliation>
</author>
<author>
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<settlement type="city">Toronto</settlement>
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</affiliation>
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<author>
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<nlm:affiliation>Institut Curie, PSL Research University, Mines Paris Tech, Inserm, Paris, France.</nlm:affiliation>
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<country xml:lang="fr">France</country>
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<country xml:lang="fr">Royaume-Uni</country>
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<nlm:affiliation>Institute of Data Science and Biotechnology, Gladstone Institutes, San Francisco, United States.</nlm:affiliation>
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<settlement type="city">San Francisco</settlement>
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<nlm:affiliation>Department of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Maastricht, The Netherlands.</nlm:affiliation>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Department of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Maastricht</wicri:regionArea>
<wicri:noRegion>Maastricht</wicri:noRegion>
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<nlm:affiliation>Department of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Maastricht, The Netherlands.</nlm:affiliation>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Department of Bioinformatics-BiGCaT, NUTRIM, Maastricht University, Maastricht</wicri:regionArea>
<wicri:noRegion>Maastricht</wicri:noRegion>
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<affiliation wicri:level="1">
<nlm:affiliation>Maastricht Centre for Systems Biology, Maastricht University, Maastricht, The Netherlands.</nlm:affiliation>
<country xml:lang="fr">Pays-Bas</country>
<wicri:regionArea>Maastricht Centre for Systems Biology, Maastricht University, Maastricht</wicri:regionArea>
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<affiliation wicri:level="1">
<nlm:affiliation>Helmholtz Zentrum München, Institute of Computational Biology, Neuherberg, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Helmholtz Zentrum München, Institute of Computational Biology, Neuherberg</wicri:regionArea>
<wicri:noRegion>Neuherberg</wicri:noRegion>
<wicri:noRegion>Neuherberg</wicri:noRegion>
<wicri:noRegion>Neuherberg</wicri:noRegion>
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<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Center for Mathematics, Technische Universität München, Garching</wicri:regionArea>
<wicri:noRegion>Garching</wicri:noRegion>
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<settlement type="city">Munich</settlement>
<region type="land" nuts="1">Bavière</region>
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<affiliation wicri:level="3">
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<country xml:lang="fr">Allemagne</country>
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<region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region>
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</affiliation>
</author>
<author>
<name sortKey="Schreiber, Falk" sort="Schreiber, Falk" uniqKey="Schreiber F" first="Falk" last="Schreiber">Falk Schreiber</name>
<affiliation wicri:level="4">
<nlm:affiliation>University of Konstanz, Department of Computer and Information Science, Konstanz, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>University of Konstanz, Department of Computer and Information Science, Konstanz</wicri:regionArea>
<placeName>
<region type="land" nuts="1">Bade-Wurtemberg</region>
<region type="district" nuts="2">District de Fribourg-en-Brisgau</region>
<settlement type="city">Constance (Allemagne)</settlement>
</placeName>
<orgName type="university">Université de Constance</orgName>
</affiliation>
<affiliation wicri:level="3">
<nlm:affiliation>Monash University, Faculty of Information Technology, Melbourne, Australia.</nlm:affiliation>
<country xml:lang="fr">Australie</country>
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<placeName>
<settlement type="city">Melbourne</settlement>
<region type="état">Victoria (État)</region>
</placeName>
</affiliation>
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<author>
<name sortKey="Dr Ger, Andreas" sort="Dr Ger, Andreas" uniqKey="Dr Ger A" first="Andreas" last="Dr Ger">Andreas Dr Ger</name>
<affiliation wicri:level="3">
<nlm:affiliation>Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Bioinformatics and Medical Informatics (IBMI), University of Tübingen, 72076, Tübingen, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Computational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Bioinformatics and Medical Informatics (IBMI), University of Tübingen, 72076, Tübingen</wicri:regionArea>
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<region type="land" nuts="1">Bade-Wurtemberg</region>
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<affiliation wicri:level="3">
<nlm:affiliation>Department of Computer Science, University of Tübingen, 72076, Tübingen, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Computer Science, University of Tübingen, 72076, Tübingen</wicri:regionArea>
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<region type="land" nuts="1">Bade-Wurtemberg</region>
<region type="district" nuts="2">District de Tübingen</region>
<settlement type="city">Tübingen</settlement>
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</affiliation>
<affiliation wicri:level="3">
<nlm:affiliation>German Center for Infection Research (DZIF), partner site, Tübingen, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>German Center for Infection Research (DZIF), partner site, Tübingen</wicri:regionArea>
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<region type="land" nuts="1">Bade-Wurtemberg</region>
<region type="district" nuts="2">District de Tübingen</region>
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</affiliation>
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<name sortKey="Demir, Emek" sort="Demir, Emek" uniqKey="Demir E" first="Emek" last="Demir">Emek Demir</name>
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<nlm:affiliation>Department of Molecular and Medical Genetics, School of Medicine, Oregon Health & Science University, Portland, USA.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Molecular and Medical Genetics, School of Medicine, Oregon Health & Science University, Portland</wicri:regionArea>
<placeName>
<settlement type="city">Portland</settlement>
<region type="state">Oregon</region>
</placeName>
<orgName type="university">Université des sciences et de la médecine de l'Oregon</orgName>
</affiliation>
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<author>
<name sortKey="Wolkenhauer, Olaf" sort="Wolkenhauer, Olaf" uniqKey="Wolkenhauer O" first="Olaf" last="Wolkenhauer">Olaf Wolkenhauer</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Systems Biology & Bioinformatics, University of Rostock, Rostock, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Department of Systems Biology & Bioinformatics, University of Rostock, Rostock</wicri:regionArea>
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<wicri:noRegion>Rostock</wicri:noRegion>
<wicri:noRegion>Rostock</wicri:noRegion>
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<affiliation wicri:level="1">
<nlm:affiliation>Stellenbosch Institute of Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, 7602, Stellenbosch, South Africa.</nlm:affiliation>
<country xml:lang="fr">Afrique du Sud</country>
<wicri:regionArea>Stellenbosch Institute of Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, 7602, Stellenbosch</wicri:regionArea>
<wicri:noRegion>Stellenbosch</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Furlong, Laura I" sort="Furlong, Laura I" uniqKey="Furlong L" first="Laura I" last="Furlong">Laura I. Furlong</name>
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<nlm:affiliation>Research Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Department of Experimental and Health Sciences, Pompeu Fabra University, Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Research Programme on Biomedical Informatics, Hospital del Mar Medical Research Institute, Department of Experimental and Health Sciences, Pompeu Fabra University, Barcelona</wicri:regionArea>
<placeName>
<settlement type="city">Barcelone</settlement>
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</affiliation>
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<name sortKey="Barillot, Emmanuel" sort="Barillot, Emmanuel" uniqKey="Barillot E" first="Emmanuel" last="Barillot">Emmanuel Barillot</name>
<affiliation wicri:level="3">
<nlm:affiliation>Institut Curie, PSL Research University, Mines Paris Tech, Inserm, Paris, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Institut Curie, PSL Research University, Mines Paris Tech, Inserm, Paris</wicri:regionArea>
<placeName>
<region type="region">Île-de-France</region>
<region type="old region">Île-de-France</region>
<settlement type="city">Paris</settlement>
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</affiliation>
</author>
<author>
<name sortKey="Dopazo, Joaquin" sort="Dopazo, Joaquin" uniqKey="Dopazo J" first="Joaquin" last="Dopazo">Joaquin Dopazo</name>
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<nlm:affiliation>Clinical Bioinformatics Area, Fundación Progreso y Salud. Hosp. Virgen del Rocío, Sevilla, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Clinical Bioinformatics Area, Fundación Progreso y Salud. Hosp. Virgen del Rocío, Sevilla</wicri:regionArea>
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<nlm:affiliation>Bioinformatics in Rare Diseases. Centro de Investigación Biomédica en Red de Enfermedades Raras, Fundación Progreso y Salud, Hosp. Virgen del Rocío, Sevilla, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
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<affiliation wicri:level="2">
<nlm:affiliation>INB-ELIXIR-es, FPS, Hospital Virgen del Rocío, Sevilla, 42013, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>INB-ELIXIR-es, FPS, Hospital Virgen del Rocío, Sevilla, 42013</wicri:regionArea>
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<region nuts="2" type="communauté">Castille-et-León</region>
</placeName>
</affiliation>
<affiliation wicri:level="1">
<nlm:affiliation>Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Sevilla, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Institute of Biomedicine of Seville (IBIS), Hospital Virgen del Rocio, 41013, Sevilla</wicri:regionArea>
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</author>
<author>
<name sortKey="Orta Resendiz, Aurelio" sort="Orta Resendiz, Aurelio" uniqKey="Orta Resendiz A" first="Aurelio" last="Orta-Resendiz">Aurelio Orta-Resendiz</name>
<affiliation wicri:level="3">
<nlm:affiliation>HIV, Inflammation and Persistence Unit, Virology Department, Institut Pasteur, Paris, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>HIV, Inflammation and Persistence Unit, Virology Department, Institut Pasteur, Paris</wicri:regionArea>
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<region type="region">Île-de-France</region>
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<affiliation wicri:level="3">
<nlm:affiliation>Bio Sorbonne Paris Cité, Université de Paris, Paris, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
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<placeName>
<region type="region">Île-de-France</region>
<region type="old region">Île-de-France</region>
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</placeName>
</affiliation>
</author>
<author>
<name sortKey="Messina, Francesco" sort="Messina, Francesco" uniqKey="Messina F" first="Francesco" last="Messina">Francesco Messina</name>
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<nlm:affiliation>Dipartimento di Epidemiologia Ricerca Pre-Clinica e Diagnostica Avanzata, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Dipartimento di Epidemiologia Ricerca Pre-Clinica e Diagnostica Avanzata, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome</wicri:regionArea>
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<settlement type="city">Rome</settlement>
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<affiliation wicri:level="3">
<nlm:affiliation>COVID 19 INMI Network Medicine for IDs Study Group, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>COVID 19 INMI Network Medicine for IDs Study Group, National Institute for Infectious Diseases "Lazzaro Spallanzani" I.R.C.C.S., Rome</wicri:regionArea>
<placeName>
<settlement type="city">Rome</settlement>
<region nuts="2">Latium</region>
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<author>
<name sortKey="Valencia, Alfonso" sort="Valencia, Alfonso" uniqKey="Valencia A" first="Alfonso" last="Valencia">Alfonso Valencia</name>
<affiliation wicri:level="3">
<nlm:affiliation>Barcelona Supercomputing Center (BSC), Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Barcelona Supercomputing Center (BSC), Barcelona</wicri:regionArea>
<placeName>
<settlement type="city">Barcelone</settlement>
<region nuts="2" type="region">Catalogne</region>
</placeName>
</affiliation>
<affiliation wicri:level="3">
<nlm:affiliation>Institucio Catalana de Recerca I Estudis Avançats (ICREA), Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Institucio Catalana de Recerca I Estudis Avançats (ICREA), Barcelona</wicri:regionArea>
<placeName>
<settlement type="city">Barcelone</settlement>
<region nuts="2" type="region">Catalogne</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Funahashi, Akira" sort="Funahashi, Akira" uniqKey="Funahashi A" first="Akira" last="Funahashi">Akira Funahashi</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa</wicri:regionArea>
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</affiliation>
</author>
<author>
<name sortKey="Kitano, Hiroaki" sort="Kitano, Hiroaki" uniqKey="Kitano H" first="Hiroaki" last="Kitano">Hiroaki Kitano</name>
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<nlm:affiliation>The Systems Biology Institute, Shinagawa, Tokyo, Japan.</nlm:affiliation>
<country xml:lang="fr">Japon</country>
<wicri:regionArea>The Systems Biology Institute, Shinagawa, Tokyo</wicri:regionArea>
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<settlement type="city">Tokyo</settlement>
<region type="région">Région de Kantō</region>
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<affiliation wicri:level="1">
<nlm:affiliation>Okinawa Institute of Science and Technology Graduate University, Kunigami, Okinawa, Japan.</nlm:affiliation>
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<name sortKey="Kitano, Hiroaki" sort="Kitano, Hiroaki" uniqKey="Kitano H" first="Hiroaki" last="Kitano">Hiroaki Kitano</name>
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